Die PAM250 Matrix

     
 
Cys  12
Gly  -3   5
Pro  -3  -1   6
Ser   0   1   1   1
Ala  -2   1   1   1   2
Thr  -2   0   0   1   1   3
Asp  -5   1  -1   0   0   0   4
Glu  -5   0  -1   0   0   0   3   4
Asn  -4   0  -1   1   0   0   2   1   2
Gln  -5  -1   0  -1   0  -1   2   2   1   4
His  -3  -2   0  -1  -1  -1   1   1   2   3   6
Lys  -5  -2  -1   0  -1   0   0   0   1   1   0   5
Arg  -4  -3   0   0  -2  -1  -1  -1   0   1   2   3   6
Val  -2  -1  -1  -1   0   0  -2  -2  -2  -2  -2  -2  -2   4
Met  -5  -3  -2  -2  -1  -1  -3  -2   0  -1  -2   0   0   2   6
Ile  -2  -3  -2  -1  -1   0  -2  -2  -2  -2  -2  -2  -2   4   2   5
Leu  -6  -4  -3  -3  -2  -2  -4  -3  -3  -2  -2  -3  -3   2   4   2   6
Phe  -4  -5  -5  -3  -4  -3  -6  -5  -4  -5  -2  -5  -4  -1   0   1   2   9
Tyr   0  -5  -5  -3  -3  -3  -4  -4  -2  -4   0  -4  -5  -2  -2  -1  -1   7  10
Trp  -8  -7  -6  -2  -6  -5  -7  -7  -4  -5  -3  -3   2  -6  -4  -5  -2   0   0  17
     Cys Gly Pro Ser Ala Thr Asp Glu Asn Gln His Lys Arg Val Met Ile Leu Phe Tyr Trp