Score E
Sequences producing significant alignments: (bits) Value
gb|AAC63017.1| (AF082008) galactokinase [Lactococcus lactis] 245 8e-65
gb|AAD11510.1| (U60828) galactokinase [Lactococcus lactis] 244 2e-64
emb|CAB44216.1| (AJ011653) galactokinase [Lactococcus lactis] 243 5e-64
gb|AAD00093.1| (U61402) galactokinase [Streptococcus thermo... 161 2e-39
gb|AAD49612.1| (AF152357) galactokinase GalK [Streptococcus... 157 3e-38
sp|P96993|GAL1_STRMU GALACTOKINASE >gi|7434205|pir||JC5311 ... 156 7e-38
gb|AAF25548.1|AF109295_3 (AF109295) GalK [Staphylococcus ca... 143 7e-34
sp|O84902|GAL1_LACCA GALACTOKINASE >gi|3201656|gb|AAC19328.... 139 8e-33
sp|Q00052|GAL1_LACHE GALACTOKINASE >gi|421585|pir||A47032 g... 135 2e-31
sp|P39574|GAL1_BACSU GALACTOKINASE >gi|629042|pir||S39690 g... 120 6e-27
gb|AAC63017.1| (AF082008) galactokinase [Lactococcus lactis]
Length = 124
Score = 245 bits (620), Expect = 8e-65
Identities = 124/124 (100%), Positives = 124/124 (100%)
Query: 1 LIKRARHAVYENNRAKIAQKAFVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQ 60
LIKRARHAVYENNRAKIAQKAFVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQ
Sbjct: 1 LIKRARHAVYENNRAKIAQKAFVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQ 60
Query: 61 KQAGVLGARMTGAGFGGCAIALVAHDNVSAFEKAVGQVYEEVVGYPASFYVAQIGSGSTK 120
KQAGVLGARMTGAGFGGCAIALVAHDNVSAFEKAVGQVYEEVVGYPASFYVAQIGSGSTK
Sbjct: 61 KQAGVLGARMTGAGFGGCAIALVAHDNVSAFEKAVGQVYEEVVGYPASFYVAQIGSGSTK 120
Query: 121 LDVE 124
LDVE
Sbjct: 121 LDVE 124
gb|AAD11510.1| (U60828) galactokinase [Lactococcus lactis]
Length = 399
Score = 244 bits (616), Expect = 2e-64
Identities = 123/124 (99%), Positives = 123/124 (99%)
Query: 1 LIKRARHAVYENNRAKIAQKAFVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQ 60
LIKRARHAVYENNR KIAQKAFVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQ
Sbjct: 276 LIKRARHAVYENNRTKIAQKAFVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQ 335
Query: 61 KQAGVLGARMTGAGFGGCAIALVAHDNVSAFEKAVGQVYEEVVGYPASFYVAQIGSGSTK 120
KQAGVLGARMTGAGFGGCAIALVAHDNVSAFEKAVGQVYEEVVGYPASFYVAQIGSGSTK
Sbjct: 336 KQAGVLGARMTGAGFGGCAIALVAHDNVSAFEKAVGQVYEEVVGYPASFYVAQIGSGSTK 395
Query: 121 LDVE 124
LDVE
Sbjct: 396 LDVE 399
emb|CAB44216.1| (AJ011653) galactokinase [Lactococcus lactis]
Length = 399
Score = 243 bits (613), Expect = 5e-64
Identities = 122/124 (98%), Positives = 123/124 (98%)
Query: 1 LIKRARHAVYENNRAKIAQKAFVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQ 60
LIKRARHAVYENNR KIAQKAFVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQ
Sbjct: 276 LIKRARHAVYENNRTKIAQKAFVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQ 335
Query: 61 KQAGVLGARMTGAGFGGCAIALVAHDNVSAFEKAVGQVYEEVVGYPASFYVAQIGSGSTK 120
KQAGVLGARMTGAGFGGCAIALVAHDNVSAFEKAVG+VYEEVVGYPASFYVAQIGSGSTK
Sbjct: 336 KQAGVLGARMTGAGFGGCAIALVAHDNVSAFEKAVGEVYEEVVGYPASFYVAQIGSGSTK 395
Query: 121 LDVE 124
LDVE
Sbjct: 396 LDVE 399
gb|AAD00093.1| (U61402) galactokinase [Streptococcus thermophilus]
Length = 388
Score = 161 bits (403), Expect = 2e-39
Identities = 83/121 (68%), Positives = 92/121 (75%)
Query: 2 IKRARHAVYENNRAKIAQKAFVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQK 61
IKRARH V EN R A+KA G+L FG L+NASH SL+ DYEVTGLELDTLA TA +
Sbjct: 268 IKRARHVVLENQRTLQARKALETGDLEGFGRLMNASHVSLEYDYEVTGLELDTLAHTAWE 327
Query: 62 QAGVLGARMTGAGFGGCAIALVAHDNVSAFEKAVGQVYEEVVGYPASFYVAQIGSGSTKL 121
Q GVLGARMTGAGFGGCAIALV D V F+KAVGQ YEEVVGY SFY+A++ GS L
Sbjct: 328 QEGVLGARMTGAGFGGCAIALVNKDKVEDFKKAVGQRYEEVVGYAPSFYIAEVTGGSRVL 387
Query: 122 D 122
D
Sbjct: 388 D 388
gb|AAD49612.1| (AF152357) galactokinase GalK [Streptococcus thermophilus]
Length = 395
Score = 157 bits (393), Expect = 3e-38
Identities = 78/122 (63%), Positives = 91/122 (73%)
Query: 1 LIKRARHAVYENNRAKIAQKAFVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQ 60
LI+RARHAV EN R A+ GNL FG+LLNASH SL+ DYEVTG+ELDTL + AQ
Sbjct: 268 LIRRARHAVTENQRTLEAKAELEKGNLAAFGKLLNASHYSLRHDYEVTGIELDTLVDAAQ 327
Query: 61 KQAGVLGARMTGAGFGGCAIALVAHDNVSAFEKAVGQVYEEVVGYPASFYVAQIGSGSTK 120
KQ GVLGARMTGAGFGGCAIALV +N+ FE V Y +V+GY FYVA IG+G+TK
Sbjct: 328 KQEGVLGARMTGAGFGGCAIALVKEENIPEFENNVYDAYLKVIGYAPEFYVAHIGNGTTK 387
Query: 121 LD 122
+D
Sbjct: 388 ID 389
sp|P96993|GAL1_STRMU GALACTOKINASE >gi|7434205|pir||JC5311 galactokinase (EC 2.7.1.6) -
Streptococcus mutans >gi|1877422|gb|AAB49736.1| (U21942)
galactokinase [Streptococcus mutans]
Length = 390
Score = 156 bits (390), Expect = 7e-38
Identities = 77/120 (64%), Positives = 92/120 (76%)
Query: 2 IKRARHAVYENNRAKIAQKAFVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQK 61
IKRARHAV EN R A+KA AG+L KFG L+NASH SL+ DYEVTG+ELDTLA TA +
Sbjct: 268 IKRARHAVSENQRTLKAKKALAAGDLEKFGRLVNASHVSLEHDYEVTGIELDTLAHTAWE 327
Query: 62 QAGVLGARMTGAGFGGCAIALVAHDNVSAFEKAVGQVYEEVVGYPASFYVAQIGSGSTKL 121
Q GVLGARMTG+GFGGC IA+VA D V+A ++ VG++Y E VGY FY+A+I GS L
Sbjct: 328 QEGVLGARMTGSGFGGCGIAIVAKDKVAALKENVGRIYTETVGYAPRFYIAEIAGGSRVL 387
gb|AAF25548.1|AF109295_3 (AF109295) GalK [Staphylococcus carnosus]
Length = 388
Score = 143 bits (356), Expect = 7e-34
Identities = 71/117 (60%), Positives = 86/117 (72%)
Query: 1 LIKRARHAVYENNRAKIAQKAFVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQ 60
L++RARHA+ EN R K A A + +FG LLNASHASLK+DYEVTG+ELDTLAETAQ
Sbjct: 266 LLRRARHAITENARVKEAHAALNRKDFIEFGRLLNASHASLKNDYEVTGIELDTLAETAQ 325
Query: 61 KQAGVLGARMTGAGFGGCAIALVAHDNVSAFEKAVGQVYEEVVGYPASFYVAQIGSG 117
+ GVLGARMTGAGF GCAIALV D + E+ V ++Y++ +GY SFY IG G
Sbjct: 326 QVEGVLGARMTGAGFAGCAIALVHKDRIKDLEEEVTKIYKDKIGYEPSFYHVDIGDG 382
sp|O84902|GAL1_LACCA GALACTOKINASE >gi|3201656|gb|AAC19328.1| (AF005933) galactokinase
[Lactobacillus casei]
Length = 387
Score = 139 bits (347), Expect = 8e-33
Identities = 73/122 (59%), Positives = 86/122 (69%)
Query: 1 LIKRARHAVYENNRAKIAQKAFVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQ 60
LIKRARHAV+EN R A KA G+L FG+L++AS SL DYEVTG+ELDTL A
Sbjct: 266 LIKRARHAVFENQRTLKASKALQDGDLKTFGKLVSASGVSLAFDYEVTGIELDTLVTNAL 325
Query: 61 KQAGVLGARMTGAGFGGCAIALVAHDNVSAFEKAVGQVYEEVVGYPASFYVAQIGSGSTK 120
KQ GVLGARMTGAGFGGCAIA+V +V F VG+ Y E +GY A FYVA I G+ +
Sbjct: 326 KQRGVLGARMTGAGFGGCAIAIVNSADVEDFIDNVGKTYREKIGYDAHFYVADIADGAKQ 385
Query: 121 LD 122
L+
Sbjct: 386 LN 387
sp|Q00052|GAL1_LACHE GALACTOKINASE >gi|421585|pir||A47032 galactokinase galK -
Lactobacillus helveticus >gi|44000|emb|CAA40525.1|
(X57248) galactokinase [Lactobacillus helveticus]
Length = 388
Score = 135 bits (336), Expect = 2e-31
Identities = 70/120 (58%), Positives = 83/120 (68%)
Query: 2 IKRARHAVYENNRAKIAQKAFVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQK 61
IKRARHAV EN R A +A G+L K G L+NASH SL DYEVTG ELDTLAE + K
Sbjct: 269 IKRARHAVSENQRTLRATQAMKDGDLEKLGRLINASHESLHYDYEVTGKELDTLAEASWK 328
Query: 62 QAGVLGARMTGAGFGGCAIALVAHDNVSAFEKAVGQVYEEVVGYPASFYVAQIGSGSTKL 121
Q GVLGARM G GFGG AIA+V F+K VG++Y + VGY ASFY A+I G+ ++
Sbjct: 329 QPGVLGARMIGGGFGGSAIAIVKKSEAENFKKNVGKIYRDAVGYDASFYDAEIVDGTKRI 388
sp|P39574|GAL1_BACSU GALACTOKINASE >gi|629042|pir||S39690 galactokinase (EC 2.7.1.6)
galK - Bacillus subtilis >gi|413959|emb|CAA51591.1|
(X73124) ipa-35d galK [Bacillus subtilis]
>gi|2636355|emb|CAB15846.1| (Z99123) galactokinase
[Bacillus subtilis]
Length = 390
Score = 120 bits (297), Expect = 6e-27
Identities = 62/122 (50%), Positives = 78/122 (63%)
Query: 3 KRARHAVYENNRAKIAQKAFVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQKQ 62
+RA+HAVYEN+RA F N+ + G+L+ SH SLKDDYEVT ELD L A
Sbjct: 269 RRAKHAVYENHRAIKTAHMFKENNIDEIGQLMKESHLSLKDDYEVTCPELDELVFAAWDH 328
Query: 63 AGVLGARMTGAGFGGCAIALVAHDNVSAFEKAVGQVYEEVVGYPASFYVAQIGSGSTKLD 122
GV+G+RMTGAGFGGC I++V + V F + VG Y+E G A FYVA IG G+ +L
Sbjct: 329 EGVIGSRMTGAGFGGCTISIVKDEFVDDFIQKVGDRYQEKTGLRADFYVADIGEGARELK 388
Query: 123 VE 124
E
Sbjct: 389 GE 390
Database: nr
Posted date: Apr 24, 2000 9:45 PM
Number of letters in database: 155,672,339
Number of sequences in database: 496,499
Lambda K H
0.315 0.132 0.361
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34609304
Number of Sequences: 496499
Number of extensions: 1238164
Number of successful extensions: 3880
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 3814
Number of HSP's gapped (non-prelim): 55
length of query: 124
length of database: 155,672,339
effective HSP length: 57
effective length of query: 67
effective length of database: 127,371,896
effective search space: 8533917032
effective search space used: 8533917032
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 65 (29.7 bits)